Config files

• config.yaml: sets all the runtime configurations for the pipeline like output folder, resources folder, genome, tool-parameters etc.
• samples.tsv: tab delimited sample manifest. Defaults to the samples in the .test folder of the pipeline
• multiqc_atacseq_config.yaml: custom-multiqc config file for report generation
• create_test_config_sample_manifest_files.bash: replicates variables PIPELINE_HOME and WORKDIR etc. to create sample manifest for testing purposes