gbff2gft not work

[ysuzuki1978]

I used bioconvert to convert from gbff format to GTF format. First I tried to convert to gff3 format, but the output is empty of gff3 traces.
There is no error message.
What is the best way to handle this?

Best regard

bioconvert genbank2gff3 ./BQMF01.1.gbff ./BQMF.gff3 --force

BQMF.gff3
##gff-version 3

[cokelaer]

@ysuzuki1978 the best would be to share the input gbff file so that we can try to fix the issue locally. Is this possible ? thanks

[tuspjo]

ten months later, but I think the issue is just that the extension gbff is not recognized, try renaming to .gbk and rerun, worked for me on a genome downloaded from NCBI. I just submitted an issue on this, as it would be nice if the gbff extension was recognized by bioconvert.