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genbank2gff3 not recognizing gbff extension #342

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tuspjo opened this issue Feb 13, 2024 · 0 comments
Open

genbank2gff3 not recognizing gbff extension #342

tuspjo opened this issue Feb 13, 2024 · 0 comments

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@tuspjo
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tuspjo commented Feb 13, 2024

Version of bioconvert

1.1.1

Command or code used

bioconvert something.gbff something.gff3

Your results

ERROR [bioconvert.scripts.converter:48]:
Bioconvert does not support conversion ('gbff',) -> ('gff3',).

What you think might have happened

It seems that bioconvert genbank2gff3 doesn't recognize the gbff extension, which is standard for downloading genomes from NCBI. So it's currently necessary to rename file extensions to gbk to convert to gff3

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