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New format for MorpheusML for multi-scale spatial simulations #703

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jonrkarr opened this issue May 26, 2021 · 0 comments · May be fixed by #715
Open

New format for MorpheusML for multi-scale spatial simulations #703

jonrkarr opened this issue May 26, 2021 · 0 comments · May be fixed by #715
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concept/term addition Request for a new concept(s), or change(s) to existing concept(s)
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@jonrkarr
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Format name: Morpheus Markup Language

Short description: Format for multi-scale spatial simulations.

Parent URI(s): format_2332|format_2013

Is Format Of:

exactSynonym(s): MorpheusML

Specification: https://gitlab.com/morpheus.lab/morpheus/-/blob/master/morpheus/core/simulation.xsd

Documentation: https://morpheus.gitlab.io/courses/getting-started/behind-the-scenes/

Wikipedia:

Publication: 10.1093/bioinformatics/btt772

Data represented: data_3241|data_3869

File extension(s): xml

Example(s): https://morpheus.gitlab.io/models/

Information standard(s): https://co.mbine.org/standards/miase

Ontologies used:

Governing organisation(s):

Media type: application/morpheusml+xml

Comment: I left Is Format Of blank. I'm not sure how this is different from Data represented

@matuskalas matuskalas added this to To do in release 1.26 May 27, 2021
@matuskalas matuskalas added the concept/term addition Request for a new concept(s), or change(s) to existing concept(s) label May 27, 2021
@matuskalas matuskalas added this to the 1.26 milestone May 27, 2021
@raashika03 raashika03 linked a pull request Jun 4, 2021 that will close this issue
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