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Data concept for Mass Spec Imaging (MSI) #867

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cKNUSPeR opened this issue Aug 30, 2023 · 0 comments
Open

Data concept for Mass Spec Imaging (MSI) #867

cKNUSPeR opened this issue Aug 30, 2023 · 0 comments

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@cKNUSPeR
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Instructions: When making a request, replace the text < between chevrons > after first reading the instructions. The instructions can be removed. Do not change any other text, and please try to complete as much information as you can (your request will get acted on sooner if you do).

Data name: < MSI image >

Instructions: Name of the type of data, e.g. "Protein sequence". This is the most commonly used term.

Short description: < Raw aquisition dat generated by Mass Spectrometry Imaging. >

Instructions: Short description, e.g. "One or more protein sequences, possibly with associated annotation." A sentence or two describing the type of data. Keep it concise, lucid and avoid jargon and acronyms. See http://edamontology.org/data_0006 for examples.

Parent URI(s): < http://edamonthology.org/dat_3424 >

Instructions: URI(s) of suggested EDAM Data parent e.g. "http://edamontology.org/data_2044". Data concepts have a single parent only.

Has Topic(s): < http://edamontology.org/topic_3391 | http://edamontology.org/topic_3382 >

exactSynonym(s): < >

Instructions: Exact synonym(s) delimited by pipe ('|') e.g. "Protein sequences". Other commonly-used terms, acronyms etc. by which the concept is referred to.

Wikipedia: < https://en.wikipedia.org/wiki/Mass_spectrometry_imaging >

Instructions: URL(s) to Wikipedia pages delimited by pipe ('|') e.g. "https://en.wikipedia.org/wiki/Protein_primary_structure". Provide link(s) to relevant Wikipedia pages, if any.

Comment: < The file formats for Mass Spec Imaging are already implemented, but the data concept is not yet added. Currently the bio.tools annotations are scattered between Image and Mass Spec Data. his data concept aims to unify this split.>

Instructions: Comment to the EDAM developers. Add any comments you like for the EDAM developers to consider.

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