Erorr after run ./run_05_fullBurst_resample

[InSAR2023]

Completed Parsing the Configuration file
Functions to be executed:
['Function-1']
Running: resamp_withCarrier
['--secondary', '/media/ahmed/easythree/Data/secondarys/20210218', '--reference', '/media/ahmed/easythree/Data/reference', '--coregdir', '/media/ahmed/easythree/Data/coreg_secondarys/20210218', '--azimuth_misreg', '/media/ahmed/easythree/Data/misreg/azimuth/dates/20210218.txt', '--range_misreg', '/media/ahmed/easythree/Data/misreg/range/dates/20210218.txt']
This is the Open Source version of ISCE.
Some of the workflows depend on a separate licensed package.
To obtain the licensed package, please make a request for ISCE
through the website: https://download.jpl.nasa.gov/ops/request/index.cfm.
Alternatively, if you are a member, or can become a member of WinSAR
you may be able to obtain access to a version of the licensed sofware at
https://winsar.unavco.org/software/isce
Estimated burst offset: 0
Shifts: {0: 0, 1: 0, 2: -1, 3: 0}
Polynomial Order: 0 - by - 0
0
Polynomial Order: 0 - by - 0
0
Traceback (most recent call last):
File "/home/ahmed/tools_insar/proc_insar/isce2/contrib/stack/topsStack/SentinelWrapper.py", line 251, in
main(args.start,args.end)
File "/home/ahmed/tools_insar/proc_insar/isce2/contrib/stack/topsStack/SentinelWrapper.py", line 242, in main
cfgParser.runCmd()
File "/home/ahmed/tools_insar/proc_insar/isce2/contrib/stack/topsStack/SentinelWrapper.py", line 54, in runCmd
func_modules.main(self.funcParams[section])
File "/home/ahmed/tools_insar/proc_insar/isce2/contrib/stack/topsStack/resamp_withCarrier.py", line 259, in main
azCarrPoly, dpoly = secondary.estimateAzimuthCarrierPolynomials(slvBurst, offset = -1.0 * offset)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.10/site-packages/isce/components/isceobj/Sensor/TOPS/TOPSSwathSLCProduct.py", line 285, in estimateAzimuthCarrierPolynomials
x = np.arange(0, burst.numberOfSamples,xstep,dtype=np.int)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.10/site-packages/numpy/init.py", line 305, in getattr
raise AttributeError(former_attrs[attr])
AttributeError: module 'numpy' has no attribute 'int'.
np.int was a deprecated alias for the builtin int. To avoid this error in existing code, use int by itself. Doing this will not modify any behavior and is safe. When replacing np.int, you may wish to use e.g. np.int64 or np.int32 to specify the precision. If you wish to review your current use, check the release note link for additional information.
The aliases was originally deprecated in NumPy 1.20; for more details and guidance see the original release note at:
https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations. Did you mean: 'inf'?

[yuankailiu]

Hi @rtburns-jpl and @InSAR2023,

I am using the latest source code (with #639). I got the same thing in run_01_unpack_topo_reference inside Sentinel1.py here

Although #639 fix the np.complex, the rest of the deprecated aliases are still there. Like np.int in several places.

#649 shows a temporary workaround to downgrade the numpy to 1.23.

[rtburns-jpl]

I think you can just replace np.int with int anywhere it's used. I'll issue a PR to do this treewide.

[InSAR2023]

After run below codes, it's works.

python -m pip uninstall numpy
python -m pip install numpy==1.23.1

[InSAR2023]

After installing version 1.23, I get the following error:

******************** step - load_data ********************
load_data.py --template /media/ahmed/easythree/EZ-InSAR/stackmintpy/smallbaselineApp.cfg /media/ahmed/easythree/EZ-InSAR/stackmintpy/mintpyfullparametersSenAT165.cfg --project mintpyfullparametersSenAT165
processor : isce
SAR platform/sensor : Sen

prepare metadata files for isce products
prep_isce.py -m /media/ahmed/easythree/EZ-InSAR/reference/IW1.xml -g /media/ahmed/easythree/EZ-InSAR/merged/geom_reference -b /media/ahmed/easythree/EZ-InSAR/baselines -f "/media/ahmed/easythree/EZ-InSAR/merged/interferograms//filt.unw" --geom-files hgt.rdr lat.rdr lon.rdr los.rdr los.rdr shadowMask.rdr waterMask.rdr
['/media/ahmed/easythree/EZ-InSAR/reference/data.rsc'] exists and is newer than ['/media/ahmed/easythree/EZ-InSAR/reference/IW1.xml'] --> skip.
preparing RSC file for geometry files
read perp baseline time-series from /media/ahmed/easythree/EZ-InSAR/baselines
preparing RSC file for: /media/ahmed/easythree/EZ-InSAR/merged/interferograms//filt.unw
[==> 6% ] 20200107_20200119 1/18 0s / 0s
[=====> 11% ] 20200107_20200131 2/18 0s / 0s
[=======> 17% ] 20200107_20200212 3/18 0s / 0s
[==========> 22% ] 20200119_20200131 4/18 0s / 0s
[=============> 28% ] 20200119_20200212 5/18 0s / 0s
[===============> 33% ] 20200119_20200224 6/18 0s / 0s
[===================> 39% ] 20200131_20200212 7/18 0s / 0s
[=====================> 44% ] 20200131_20200224 8/18 0s / 0s
[======================= 50% ] 20200131_20200307 9/18 0s / 0s
[======================= 56% ] 20200212_20200224 10/18 0s / 0s
[======================= 61% => ] 20200212_20200307 11/18 0s / 0s
[======================= 67% =====> ] 20200212_20200319 12/18 0s / 0s
[======================= 72% =======> ] 20200224_20200307 13/18 0s / 0s
[======================= 78% ==========> ] 20200224_20200319 14/18 0s / 0s
[======================= 83% =============> ] 20200224_20200331 15/18 0s / 0s
[======================= 89% ===============> ] 20200307_20200319 16/18 0s / 0s
[======================= 94% ==================> ] 20200307_20200331 17/18 0s / 0s
[==================================================] 20200319_20200331 18/18
Done.

updateMode : True
compression: None
multilook x/ystep: 1/1
multilook method : nearest
/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/numpy/core/fromnumeric.py:3432: RuntimeWarning: Mean of empty slice.
return _methods._mean(a, axis=axis, dtype=dtype,
/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/numpy/core/_methods.py:182: RuntimeWarning: invalid value encountered in divide
ret = um.true_divide(
Traceback (most recent call last):
File "/home/ahmed/anaconda3/envs/InSARenv/bin/smallbaselineApp.py", line 10, in
sys.exit(main())
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/cli/smallbaselineApp.py", line 208, in main
run_smallbaselineApp(inps)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/smallbaselineApp.py", line 1117, in run_smallbaselineApp
app.run(steps=inps.runSteps)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/smallbaselineApp.py", line 874, in run
self.run_load_data(sname)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/smallbaselineApp.py", line 176, in run_load_data
mintpy.cli.load_data.main(iargs)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/cli/load_data.py", line 123, in main
load_data(inps)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/load_data.py", line 800, in load_data
iDict = read_subset_box(iDict)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/load_data.py", line 200, in read_subset_box
pix_box = coord.bbox_geo2radar(geo_box)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/objects/coord.py", line 450, in bbox_geo2radar
y, x, y_res, x_res = self.geo2radar(lat, lon, print_msg=print_msg)
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/objects/coord.py", line 314, in geo2radar
az[i], rg[i] = self._get_lookup_row_col(
File "/home/ahmed/anaconda3/envs/InSARenv/lib/python3.8/site-packages/mintpy/objects/coord.py", line 187, in _get_lookup_row_col
raise RuntimeError(f'No coresponding coordinate found for y/x: {y}/{x}')
RuntimeError: No coresponding coordinate found for y/x: 30.2994/-91.3913

System information

Operating system: Linux-Ubuntu (20.04)
Python environment: conda (anaconda3)
MintPy version: 1.5.1