fix(js): preset should use packages folder

[AgentEnder]

Current Behavior

TS preset generates a packages folder, but first package generated creates it in libs

Expected Behavior

TS preset generates a packages folder, and created packages are generated in packages

Context

TS preset used to extend nx/presets/core.json, but we don't do that anymore. When we moved away from that, the preset wasn't updated to generate workspaceLayout

Related Issue(s)

Fixes #10687

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✅ Successfully ran 12 targets

• nx affected --target=build --base=b9012fa66ec172cc61d86ff8002a68457980de41 --head=8986771acddc44861204528ef9a8bdb68f06560a --parallel=3
• nx affected --target=e2e --base=b9012fa66ec172cc61d86ff8002a68457980de41 --head=8986771acddc44861204528ef9a8bdb68f06560a --exclude=e2e-detox,e2e-js,e2e-next,e2e-workspace-create,e2e-workspace-integrations,e2e-workspace-core,e2e-react,e2e-web,e2e-angular-extensions,e2e-angular-core,e2e-cli,e2e-nx-plugin,e2e-cypress,e2e-node,e2e-linter,e2e-jest,e2e-a...
• nx affected --target=e2e --base=b9012fa66ec172cc61d86ff8002a68457980de41 --head=8986771acddc44861204528ef9a8bdb68f06560a --exclude=e2e-storybook,e2e-react-native,e2e-detox --parallel=1
• nx affected --target=lint --base=b9012fa66ec172cc61d86ff8002a68457980de41 --head=8986771acddc44861204528ef9a8bdb68f06560a --parallel=3
• nx affected --target=test --base=b9012fa66ec172cc61d86ff8002a68457980de41 --head=8986771acddc44861204528ef9a8bdb68f06560a --parallel=1
• nx build typedoc-theme
• nx-cloud record -- yarn check-commit
• nx-cloud record -- yarn check-imports
• nx-cloud record -- yarn depcheck
• nx-cloud record -- yarn documentation
• nx-cloud record -- yarn nx format:check --base=b9012fa66ec172cc61d86ff8002a68457980de41 --head=8986771acddc44861204528ef9a8bdb68f06560a
• nx-cloud record -- yarn nx workspace-lint

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Name	Status	Preview	Updated
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