{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"q2-dwq2","owner":"caporaso-lab","isFork":false,"description":"Educational plugin for use with *Developing with QIIME 2* (DWQ2).","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-05T13:08:28.271Z"}},{"type":"Public","name":"sourcetracker2","owner":"caporaso-lab","isFork":false,"description":"SourceTracker2","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":5,"issueCount":46,"starsCount":59,"forksCount":44,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-28T23:35:04.909Z"}},{"type":"Public","name":"q2-boots","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":4,"starsCount":0,"forksCount":4,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-17T16:16:42.939Z"}},{"type":"Public","name":"developing-with-qiime2","owner":"caporaso-lab","isFork":false,"description":"Your guide for writing, testing, and distributing QIIME 2 plugins, interfaces, and documentation.","allTopics":[],"primaryLanguage":{"name":"TeX","color":"#3D6117"},"pullRequestCount":0,"issueCount":28,"starsCount":1,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-11T14:29:29.823Z"}},{"type":"Public","name":"cookiecutter-qiime2-plugin","owner":"caporaso-lab","isFork":false,"description":"Template to help you create your new QIIME 2 plugin. 🚀","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":4,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-10T13:24:55.972Z"}},{"type":"Public","name":"qiime2.org-home","owner":"caporaso-lab","isFork":false,"description":"Prototype for updated qiime2.org homepage.","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-06T02:18:48.945Z"}},{"type":"Public","name":"q2-books","owner":"caporaso-lab","isFork":false,"description":"A prototype collection of JupyterBooks documenting QIIME 2","allTopics":[],"primaryLanguage":{"name":"TeX","color":"#3D6117"},"pullRequestCount":0,"issueCount":2,"starsCount":2,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-08T13:34:50.417Z"}},{"type":"Public","name":"caporaso-lab.github.io","owner":"caporaso-lab","isFork":false,"description":"Lab website","allTopics":[],"primaryLanguage":{"name":"SCSS","color":"#c6538c"},"pullRequestCount":1,"issueCount":1,"starsCount":1,"forksCount":21,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-28T16:21:06.523Z"}},{"type":"Public","name":"humanure-paper1","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-20T15:23:57.714Z"}},{"type":"Public","name":"genome-sampler","owner":"caporaso-lab","isFork":false,"description":"","allTopics":["hacktoberfest"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":18,"starsCount":5,"forksCount":10,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-01-04T16:34:59.313Z"}},{"type":"Public","name":".github","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-25T20:44:43.853Z"}},{"type":"Public","name":"exmp-paper1","owner":"caporaso-lab","isFork":false,"description":"Data supporting the NAU EXMP-1 and EXMP-2 (EXercise Microbiome Projects)","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-08-24T19:16:29.092Z"}},{"type":"Public","name":"pretrained-feature-classifiers","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":6,"starsCount":3,"forksCount":4,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-06-09T20:59:22.510Z"}},{"type":"Public","name":"covid-ci","owner":"caporaso-lab","isFork":false,"description":"Continuous deployment of covid analyses using Concourse CI","allTopics":["hacktoberfest"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":2,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-04-15T22:37:10.417Z"}},{"type":"Public","name":"gsheets-resource","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-03-04T20:50:18.432Z"}},{"type":"Public","name":"simple-remote-directory-resource","owner":"caporaso-lab","isFork":false,"description":"Concourse resource for handling remote directories","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-03-04T20:43:54.545Z"}},{"type":"Public","name":"docker-galaxy-stable","owner":"caporaso-lab","isFork":true,"description":"🐳📊📚 Docker Images tracking the stable Galaxy releases.","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":131,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-02-17T07:23:59.386Z"}},{"type":"Public","name":"teaching-website-source","owner":"caporaso-lab","isFork":false,"description":"Sphinx source for my teaching website","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-01-13T22:23:14.949Z"}},{"type":"Public","name":"az-covid-1","owner":"caporaso-lab","isFork":false,"description":"Scripts supporting an initial investigation of SARS-CoV-2 genomes from Arizona","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-07-07T22:24:34.644Z"}},{"type":"Public","name":"q2-phylogenomics","owner":"caporaso-lab","isFork":false,"description":"Phylogenomics toolkit and pipelines","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":2,"starsCount":0,"forksCount":2,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-04-15T02:56:23.690Z"}},{"type":"Public","name":"tax-credit-data","owner":"caporaso-lab","isFork":false,"description":"raw data from tax-credit project","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":14,"forksCount":6,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-09-19T18:04:00.291Z"}},{"type":"Public","name":"ecuador-leptospira","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-16T18:49:58.368Z"}},{"type":"Public","name":"code-of-conduct","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-05-14T20:50:41.142Z"}},{"type":"Public","name":"mockrobiota","owner":"caporaso-lab","isFork":false,"description":"A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":8,"starsCount":76,"forksCount":35,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-05-14T14:34:16.840Z"}},{"type":"Public","name":"sc18-poster","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"TeX","color":"#3D6117"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":2,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-03-29T17:08:32.636Z"}},{"type":"Public","name":"longitudinal-notebooks","owner":"caporaso-lab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":11,"forksCount":7,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-02-26T01:28:23.936Z"}},{"type":"Public","name":"crc-udca2","owner":"caporaso-lab","isFork":false,"description":"Analyses for UDCA Cancer Research submission","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-02-13T20:59:49.095Z"}},{"type":"Public","name":"tax-credit-code","owner":"caporaso-lab","isFork":false,"description":"Microbiome benchmarking code and jupyter notebooks from the tax-credit project","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":2,"forksCount":5,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-12-06T17:40:15.800Z"}},{"type":"Public","name":"sample-classifier-ms","owner":"caporaso-lab","isFork":false,"description":"Manuscript describing q2-sample-classifier","allTopics":[],"primaryLanguage":{"name":"TeX","color":"#3D6117"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-08-14T19:03:45.215Z"}},{"type":"Public archive","name":"SurveySync","owner":"caporaso-lab","isFork":false,"description":"Google Sheets Add-On to facilitate sync and validation of 3rd-party survey data","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":8,"starsCount":1,"forksCount":1,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-06-29T22:44:10.955Z"}}],"repositoryCount":37,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}