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Inherited classes not correctly documented when mocked #9657

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ascillitoe opened this issue Sep 20, 2021 · 0 comments
Closed

Inherited classes not correctly documented when mocked #9657

ascillitoe opened this issue Sep 20, 2021 · 0 comments

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@ascillitoe
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ascillitoe commented Sep 20, 2021

Describe the bug

We're experiencing an issue when documenting classes that inherit mocked classes. However, classes which inherit other classes from our own package are ok.

This issue appears to be dependent on the sphinx version:

  • sphinx<3.0: Everything is OK.
  • sphinx>=3.0 < 3.4.2: Classes that inherit mocked classes are not documented. (see sphinx #8164). This is fixed in sphinx 3.4.2.
  • sphinx>=3.4.2: The previously missing classes are now documented, but there is a problem with the "Bases" section in the docs.

Example: In the docs for alibi_detect.utils.pytorch.kernels.DeepKernel in this readthedocs build https://seldon--338.org.readthedocs.build/projects/alibi-detect/en/338/api/alibi_detect.utils.pytorch.kernels.html, the base class is listed as "Bases: torch.nn." instead of "Bases: torch.nn.Module".

How to Reproduce

$ git clone https://github.com/ascillitoe/alibi-detect.git
$ cd alibi-detect
$ pip install -r requirements/docs.txt
$ make build_docs
$ # open doc/_build/html/api/alibi_detect.utils.pytorch.kernels.html and see "Bases" section.

Expected behavior

The "Bases" section should report torch.nn.Module not torch.nn..

i.e. see
https://seldon--325.org.readthedocs.build/projects/alibi-detect/en/325/api/alibi_detect.utils.pytorch.kernels.html

Your project

https://github.com/ascillitoe/alibi-detect/tree/feature_sphinx4

Screenshots

Screenshot with sphinx==4.2

sphinx_problem

Screenshot with sphinx<3.0

sphinx_working

OS

Ubuntu 18.04 (used by readthedocs/build:6.0)

Python version

3.8.11

Sphinx version

>=3.4.2

Sphinx extensions

["sphinx.ext.autodoc",
"sphinx.ext.doctest",
"sphinx.ext.intersphinx",
"sphinx.ext.todo",
"sphinx.ext.coverage",
"sphinx.ext.mathjax",
"sphinx.ext.ifconfig",
"sphinx.ext.viewcode",
"sphinx.ext.napoleon",
"sphinx_autodoc_typehints",
"sphinxcontrib.apidoc", 
"nbsphinx",
"nbsphinx_link",  
"myst_parser"]

Extra tools

No response

Additional context

demo PR:
SeldonIO/alibi-detect#338

readthedocs demo build:
https://seldon--338.org.readthedocs.build/projects/alibi-detect/en/338/api/alibi_detect.utils.pytorch.kernels.html

@tk0miya tk0miya added this to the 4.3.0 milestone Sep 20, 2021
tk0miya added a commit that referenced this issue Sep 26, 2021
Fix #9657: autodoc: basecls for a subclass of mocked object is incorrect
@github-actions github-actions bot locked as resolved and limited conversation to collaborators Oct 27, 2021
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