Bioconductor R-package: Curated Prostate Cancer Data

cBioPortal for Cancer Genomics

WebGen Vertically Integrated Project

Inference of copy number and mutation multiplicity in oncology

Human gene annotations for the oncology domain

Multi-Omics Peptide Generator

The HTAN Data Portal

An ensemble approach to accurately detect somatic mutations using SomaticSeq

Backend server for Genome Nexus

React Frontend of cBioPortal 🎉

The CGR GWAS QC processing workflow.

An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.

Detecting various characteristics of glioblastoma using Deep Learning

SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA replication, and DNA transcription on the activities of different mutational processes. SigProfilerTopography elucidates the unique topographical characteristics of mutational signatures.

Microsatellite Instability Classification using Multiple Instance Learning

A visualization grammar and GPU-accelerated toolkit for genomic data

CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

TrialMatchAI aims to seamlessly match cancer patients to clinical trials based on their unique genomic and clinical profiles using AI

🐲 UMCCR workflow tidying 🔥