😷 Disease Ontology Semantic and Enrichment analysis
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Updated
Jun 13, 2024 - R
😷 Disease Ontology Semantic and Enrichment analysis
Visualization of Functional Enrichment Result
A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, GSEApy, pycisTarget and RcisTarget.
Code, data and results associated with the "Rare diseases cell-typing" project.
Published in GigaScience. Web app for post-GWAS/QTL analysis that performs a slew of novel bioinformatics analyses to cross-reference GWAS/QTL mapping results with a host of publicly available rice databases
🧬 Gene analysis toolkit based on R
Python package to perform enrichment analysis from omics data.
HARE: Genetic Feature Enrichment Analysis Pipeline
mulea - an R package for enrichment analysis using various ontologies and empirical FDR correction
A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)
Multi-omics analysis of LFQ proteomics and transcriptomics of an ALMS1 gene knockout cell model after TGF-B pathway stimulation.
Reactome Pathway Analysis
📊 A universal enrichment tool for interpreting omics data
🩺 MeSH Enrichment and Semantic analyses
A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
Gene Set Enrichment Analysis in Python
Multi-Scale Target Explorer systematically identifies, prioritises, and visualises cell-type-specific gene therapy targets across the phenome.
Gene Set Clustering based on Functional annotation
Function Enrichment analysis and Network construction
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