A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.
-
Updated
Jun 2, 2024 - Shell
A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.
Highly-Efficient Imaging Genetics (HEIG)
Efficient and Highly Accurate Differentially Private Statistical Genomic Analysis using Discrete Fourier Transform
GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.
Open Targets python framework for post-GWAS analysis
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
Quantitative and population genetics analyses of populations, pools, half-sib/full-sib families, and polyploids
The CGR GWAS QC processing workflow.
API for MRC-IEU OpenGWAS platform (https://gwas.mrcieu.ac.uk)
tooling for semantic search of NHGRI GWAS catalog
A nextflow pipeline to perform state-of-the-art genome-wide association studies.
Pan-genome wide association studies
Pipeline for variant annotation using Variant Effect Predictor (VEP)
Efficient variant-call data storage and retrieval library using the TileDB storage library.
Modeling and Analysis of (Statistical) Genetics data in python
TwosampleMR and MultivariableMR perform with simple commands without prior knowledge or having to go through lengthy boring protocols
Add a description, image, and links to the gwas topic page so that developers can more easily learn about it.
To associate your repository with the gwas topic, visit your repo's landing page and select "manage topics."