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Only setting -rpath-link does not set the ELF RUNPATH\nany more on gcc-14, you have to specify -rpath now. This causes some\napplications to not find their shared libraries (ppl, gfan)\n\nOtherwise, gfan fails to build/run on Fedora 40:\n```\nUsing cached file /home/release/Sage/upstream/gfan0.6.2.tar.gz\nSetting up build directory\n/home/release/Sage/local/var/tmp/sage/build/gfan-0.6.2.p1\nApplying patches from ../patches...\nApplying ../patches/Makefile.patch\n[...]\n[spkg-install] g++ -std=gnu++11 -g -O2 -DGMPRATIONAL -Wuninitialized\n-fno-omit-frame-pointer -O2 -g -c src/app_tropicalcurve.cpp\n-o src/app_tropicalcurve.o\n[spkg-install] g++ -std=gnu++11 -g -O2 -DGMPRATIONAL -Wuninitialized\n-fno-omit-frame-pointer -O2 -g -c\nsrc/app_tropicalhomotopy.cpp -o src/app_tropicalhomotopy.o\n[spkg-install] g++ -std=gnu++11 -g -O2 -DGMPRATIONAL -Wuninitialized\n-fno-omit-frame-pointer -O2 -g -c\nsrc/app_integerfactorization.cpp -o src/app_integerfactorization.o\n[spkg-install] g++ -std=gnu++11 -g -O2 -DGMPRATIONAL -Wuninitialized\n-fno-omit-frame-pointer -O2 -g -c\nsrc/app_tropicalvarietyspan.cpp -o src/app_tropicalvarietyspan.o\n[spkg-install] g++ -std=gnu++11 -g -O2 -DGMPRATIONAL -Wuninitialized\n-fno-omit-frame-pointer -O2 -g -c src/app_chowbetti.cpp -o\nsrc/app_chowbetti.o\n[spkg-install] g++ -std=gnu++11 -g -O2 -DGMPRATIONAL -Wuninitialized\n-fno-omit-frame-pointer -O2 -g -c\nsrc/symmetrictraversal.cpp -o src/symmetrictraversal.o\n[spkg-install] g++ -std=gnu++11 -g -O2 -DGMPRATIONAL -Wuninitialized\n-fno-omit-frame-pointer -O2 -g -pthread -o gfan -Wl,-rpath-\nlink,/home/release/Sage/local/lib -L/home/release/Sage/local/lib\n-Wl,-rpath-link,/home/release/Sage/local/lib\n-L/home/release/Sage/local/lib src/polynomialgcd.o src/lp_cdd.o\nsrc/parser.o src/field.o src/monomial.o src/printer.o src/polynomial.o\nsrc/termorder.o src/term.o src/vektor.o src/division.o src/buchberger.o\nsrc/wallideal.o src/lp.o src/enumeration.o src/ep_standard.o\nsrc/ep_xfig.o src/reversesearch.o src/application.o src/timer.o\nsrc/renderer.o src/field_rationals.o src/symmetry.o\nsrc/breadthfirstsearch.o src/genericwalk.o src/minkowskisum.o\nsrc/newtonpolytope.o src/tropical.o src/dimension.o src/bergman.o\nsrc/subspace.o src/polyhedralcone.o src/gfanapplication.o\nsrc/polyhedralfan.o src/tropical2.o src/field_zmodpz.o src/binomial.o\nsrc/matrix.o src/latticeideal.o src/scarf.o src/xfig.o\nsrc/halfopencone.o src/lll.o src/multiplicity.o src/substitute.o\nsrc/polymakefile.o src/saturation.o src/determinant.o\nsrc/polynomialring.o src/log.o src/tropicalbasis.o\nsrc/symmetriccomplex.o src/linalg.o src/minors.o\nsrc/continuedfractions.o src/triangulation.o src/minkowskidual.o\nsrc/regularsubdivision.o src/fieldlp.o src/field_rationalfunctions.o\nsrc/tropical_weildivisor.o src/intsinpolytope.o src/lattice.o\nsrc/graph.o src/restrictedautoreduction.o src/tropicaltraverse.o\nsrc/groebnerengine.o src/ge_gfan.o src/nbody.o\nsrc/codimoneconnectedness.o src/tropicalmap.o src/traverser_tropical.o\nsrc/traverser_groebnerfan.o src/field_rationalfunctions2.o\nsrc/mixedvolume.o src/traverser_stableintersection.o\nsrc/traverser_secondaryfan.o src/linalgfloat.o\nsrc/primarydecomposition.o src/tropicaldeterminant.o\nsrc/determinantpoly.o src/traverser_sphere.o src/gfanlib_zcone.o\nsrc/gfanlib_symmetry.o src/gfanlib_symmetriccomplex.o\nsrc/gfanlib_polyhedralfan.o src/gfanlib_zfan.o\nsrc/gfanlib_polymakefile.o src/gfanlib_mixedvolume.o\nsrc/gfanlib_circuittableint.o src/gfanlib_paralleltraverser.o\nsrc/padic.o src/integergb.o src/traverser_resultantfan.o src/bsptree.o\nsrc/traverser_resultantfanspecialization.o src/myassert.o\nsrc/traverser_bsptree.o src/gfanlib_traversal.o src/tropicalcurve.o\nsrc/packedmonomial.o src/gmpallocator.o src/app_main.o\nsrc/app_buchberger.o src/app_doesidealcontain.o src/app_facets.o\nsrc/app_groebnercone.o src/app_homogeneityspace.o src/app_homogenize.o\nsrc/app_initialforms.o src/app_interactive.o src/app_isgroebnerbasis.o\nsrc/app_ismarkedgroebnerbasis.o src/app_krulldimension.o\nsrc/app_leadingterms.o src/app_multiplymatrix.o\nsrc/app_polynomialsetunion.o src/app_render.o src/app_renderstaircase.o\nsrc/app_stats.o src/app_substitute.o src/app_supportindices.o\nsrc/app_tolatex.o src/app_transposematrix.o src/app_tropicalbasis.o\nsrc/app_tropicalintersection.o src/app_tropicalstartingcone.o\nsrc/app_tropicaltraverse.o src/app_walk.o src/app_weightvector.o\nsrc/app_scarfisgeneric.o src/app_scarfvisualize.o src/app_scarfcomplex.o\nsrc/app_sturmsequence.o src/app_latticeideal.o src/app_lll.o\nsrc/app_tropicalmultiplicity.o src/app_idealintersection.o\nsrc/app_test.o src/app_saturation.o src/app_idealproduct.o\nsrc/app_representatives.o src/app_tropicallifting.o\nsrc/app_topolyhedralfan.o src/app_tropicalbruteforce.o\nsrc/app_secondaryfan.o src/app_composepermutations.o src/app_minors.o\nsrc/app_tropicalrank.o src/app_minkowski.o src/app_triangulate.o\nsrc/app_tropicallinearspace.o src/app_combinerays.o\nsrc/app_regularsubdivision.o src/app_lpsolve.o\nsrc/app_tropicalweildivisor.o src/app_lattice.o src/app_intsinpolytope.o\nsrc/app_tropicalevaluation.o src/app_smalessixth.o\nsrc/app_smalessixth2.o src/app_nbody.o src/app_spolynomial.o\nsrc/app_link.o src/app_normalfancleanup.o src/app_tropicalfunction.o\nsrc/app_volume.o src/app_isconnected.o src/app_tropicalhypersurface.o\nsrc/app_product.o src/app_commonrefinement.o src/app_tropicalimage.o\nsrc/app_groebnerfan.o src/app_fanhomology.o\nsrc/app_genericlinearchange.o src/app_mixedvolume.o\nsrc/app_fiberpolytope.o src/app_symmetries.o src/app_evaluate.o\nsrc/app_exponentlattice.o src/app_minimalassociatedprimes.o\nsrc/app_realroots.o src/app_initialdeterminant.o src/app_fansubfan.o\nsrc/app_fancones.o src/app_issmooth.o src/app_fancoarsening.o\nsrc/app_pointconfiguration.o src/app_librarytest.o src/app_padic.o\nsrc/app_integergb.o src/app_matrixproduct.o\nsrc/app_traversetropicalintersection.o src/app_markpolynomialset.o\nsrc/app_tropicalhypersurfacereconstruction.o src/app_resultantfan.o\nsrc/app_isbalanced.o src/app_polytopealgebra.o src/app_debug.o\nsrc/app_randompolynomials.o src/app_tropicalcurve.o\nsrc/app_tropicalhomotopy.o src/app_integerfactorization.o\nsrc/app_tropicalvarietyspan.o src/app_chowbetti.o\nsrc/symmetrictraversal.o -lpthread -lcddgmp -lgmp -lm -g\n[spkg-install] gfan -> /home/release/Sage/local/var/tmp/sage/build/gfan-\n0.6.2.p1/inst/home/release/Sage/local/bin\n[spkg-install] Now running gfan to install links in\n'/home/release/Sage/local/bin/'...\n[spkg-install] ./gfan: error while loading shared libraries:\nlibcddgmp.so.0: cannot open shared object file: No such file or\ndirectory\n```\nbecause of a missing ELF RUNPATH:\n```\n$ ldd /home/release/Sage/local/var/tmp/sage/build/gfan-0.6.2.p1/src/gfan\n linux-vdso.so.1 (0x00007ffc113c5000)\n libcddgmp.so.0 => not found\n libgmp.so.10 => /lib64/libgmp.so.10 (0x00007ffb5eae2000)\n libstdc++.so.6 => /lib64/libstdc++.so.6 (0x00007ffb5e800000)\n libm.so.6 => /lib64/libm.so.6 (0x00007ffb5e71d000)\n libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007ffb5eab5000)\n libc.so.6 => /lib64/libc.so.6 (0x00007ffb5e530000)\n /lib64/ld-linux-x86-64.so.2 (0x00007ffb5eba7000)\n```\n\nURL: https://github.com/sagemath/sage/pull/37982\nReported by: Volker Braun\nReviewer(s):","shortMessageHtmlLink":"sagemathgh-37982: Link with -rpath and -rpath-link"}},{"before":null,"after":"22b8459edf27fb40e7e299e694f73a8b8df9c8a4","ref":"refs/heads/fix-gcc-14-rpath-vs-rpath-link","pushedAt":"2024-05-11T14:26:49.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"Link with -rpath and -rpath-link\n\nThe former is for the binary, the latter is for dependencies between\nshared libraries. Only setting -rpath-link does not set the ELF\nRUNPATH any more on gcc-14, you have to specify -rpath now. This\ncauses some applications to not find their shared libraries (ppl,\ngfan)","shortMessageHtmlLink":"Link with -rpath and -rpath-link"}},{"before":"58ee28135bd13dec49617367915262e94945ab91","after":"220d39327d722d7b8bf94fed123538b990168784","ref":"refs/heads/develop","pushedAt":"2024-05-11T09:57:22.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37938: Updates to linbox-1.7.0, givaro-4.2.0, fflas-ffpack-2.5.0\n\n### 📚 Description\n\nDraft PR taken from #35148. I rebased on top of 10.4 and added two more\npatches taken from upstream\n\n@ClementPernet\n\ncloses #32959\ncloses #35148\n\nURL: https://github.com/sagemath/sage/pull/37938\nReported by: Volker Braun\nReviewer(s):","shortMessageHtmlLink":"sagemathgh-37938: Updates to linbox-1.7.0, givaro-4.2.0, fflas-ffpack…"}},{"before":"22a2d756aaf82ebca817b9fa87a10ba315deacbd","after":"58ee28135bd13dec49617367915262e94945ab91","ref":"refs/heads/develop","pushedAt":"2024-05-09T14:55:06.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37938: Updates to linbox-1.7.0, givaro-4.2.0, fflas-ffpack-2.5.0\n\n### 📚 Description\n\nDraft PR taken from #35148. I rebased on top of 10.4 and added two more\npatches taken from upstream\n\n@ClementPernet\n\ncloses #32959\ncloses #35148\n\nURL: https://github.com/sagemath/sage/pull/37938\nReported by: Volker Braun\nReviewer(s):","shortMessageHtmlLink":"sagemathgh-37938: Updates to linbox-1.7.0, givaro-4.2.0, fflas-ffpack…"}},{"before":"7417e94270d1bd06ff2e93b551058c17a56e6d7b","after":"22a2d756aaf82ebca817b9fa87a10ba315deacbd","ref":"refs/heads/develop","pushedAt":"2024-05-05T11:52:01.000Z","pushType":"push","commitsCount":9,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37938: Updates to linbox-1.7.0, givaro-4.2.0, fflas-ffpack-2.5.0\n\n### 📚 Description\n\nDraft PR taken from #35148. I rebased on top of 10.4 and added two more\npatches taken from upstream\n\n@ClementPernet\n\ncloses #32959\ncloses #35148\n\nURL: https://github.com/sagemath/sage/pull/37938\nReported by: Volker Braun\nReviewer(s):","shortMessageHtmlLink":"sagemathgh-37938: Updates to linbox-1.7.0, givaro-4.2.0, fflas-ffpack…"}},{"before":null,"after":"cec595ef953bb9e180aadee8583ad5a2fa5577d3","ref":"refs/heads/implicit-surface-fix-for-cython-3.10-gcc-14","pushedAt":"2024-05-05T11:47:31.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"Fix incompatible pointer type assignment error in implicit_surface\n\nActual output:\n\nerror: assignment to 'PyObject *' {aka 'struct _object *'} from incompatible pointer type 'struct __pyx_obj_4sage_4plot_6plot3d_16implicit_surface_VertexInfo *' [-Wincompatible-pointer-types","shortMessageHtmlLink":"Fix incompatible pointer type assignment error in implicit_surface"}},{"before":"23d23790d9bcb2a4244118adad87807c1c889d84","after":"7417e94270d1bd06ff2e93b551058c17a56e6d7b","ref":"refs/heads/develop","pushedAt":"2024-05-05T10:28:02.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37584: build/pkgs/cython: Update to 3.0.10\n\n\n\n\n\n\n\n\n### :memo: Checklist\n\n\n\n- [ ] The title is concise and informative.\n- [ ] The description explains in detail what this PR is about.\n- [ ] I have linked a relevant issue or discussion.\n- [ ] I have created tests covering the changes.\n- [ ] I have updated the documentation accordingly.\n\n### :hourglass: Dependencies\n\n\n\n\n\n- Depends on #37583 (merged here)\n- Depends on #37665 (merged here)\n- Depends on #37667 (merged here)\n- Depends on https://github.com/cython/cython/commit/4e9f7307312881111b6\nf56279a83812a2309cd16 (see\nhttps://github.com/cython/cython/pull/6087#issuecomment-2013134848)\n(carried here as a patch)\n- Depends on #37646 (merged here for convenience)\n\nURL: https://github.com/sagemath/sage/pull/37584\nReported by: Matthias Köppe\nReviewer(s):","shortMessageHtmlLink":"sagemathgh-37584: build/pkgs/cython: Update to 3.0.10"}},{"before":null,"after":"e04e2462bcd79156535cd2fbe2112da91e5deb28","ref":"refs/heads/linbox-flas-givaro-4.2.0","pushedAt":"2024-05-05T00:08:28.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"More upstream patches, merge conflict fixes for version checks","shortMessageHtmlLink":"More upstream patches, merge conflict fixes for version checks"}},{"before":"e77b3df44ade2f51f750de90ad255f772a933776","after":"23d23790d9bcb2a4244118adad87807c1c889d84","ref":"refs/heads/develop","pushedAt":"2024-05-04T20:02:16.000Z","pushType":"push","commitsCount":41,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37929: `.gitignore`: Ignore `requirements-editable.txt` files\n\n\n\n\n\n\n\n\nFixes https://groups.google.com/g/sage-\nrelease/c/wmzE_V0Ji7Y/m/eFUkJwl8CQAJ @jhpalmieri\n\n### :memo: Checklist\n\n\n\n- [x] The title is concise and informative.\n- [ ] The description explains in detail what this PR is about.\n- [x] I have linked a relevant issue or discussion.\n- [ ] I have created tests covering the changes.\n- [ ] I have updated the documentation and checked the documentation\npreview.\n\n### :hourglass: Dependencies\n\n\n\n\n\nURL: https://github.com/sagemath/sage/pull/37929\nReported by: Matthias Köppe\nReviewer(s):","shortMessageHtmlLink":"sagemathgh-37929: .gitignore: Ignore requirements-editable.txt files"}},{"before":"9e968f8b8e5cf9c0b2c6ee30e8d9f4a2dd5b4d02","after":"e77b3df44ade2f51f750de90ad255f772a933776","ref":"refs/heads/develop","pushedAt":"2024-05-02T01:11:39.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37915: Replace doctests from jacobian_khuri_makdisi.py taking too long time\n\n\n\n\n\n\n\n\nWe replace doctest examples in the module\n`sage.rings.function_field.jacobian_khuri_makdisi` that are taking too\nlong time with smaller examples.\n\nBefore:\n```\nsage -t --warn-long 112.9 --random-\nseed=138126942635581110821969675305757234065\nsrc/sage/rings/function_field/jacobian_khuri_makdisi.py\n [273 tests, 162.67 s]\n```\nAfter:\n```\nsage -t --warn-long 113.1 --random-\nseed=197118826408466343693096609510579001704\nsrc/sage/rings/function_field/jacobian_khuri_makdisi.py\n [272 tests, 122.30 s]\n```\n\n### :memo: Checklist\n\n\n\n- [x] The title is concise and informative.\n- [x] The description explains in detail what this PR is about.\n- [ ] I have linked a relevant issue or discussion.\n- [ ] I have created tests covering the changes.\n- [ ] I have updated the documentation and checked the documentation\npreview.\n\n### :hourglass: Dependencies\n\n\n\n\n\nURL: https://github.com/sagemath/sage/pull/37915\nReported by: Kwankyu Lee\nReviewer(s): Matthias Köppe","shortMessageHtmlLink":"sagemathgh-37915: Replace doctests from jacobian_khuri_makdisi.py tak…"}},{"before":"0a7b2513287af1124a358c2494b8bef4668a1882","after":"9e968f8b8e5cf9c0b2c6ee30e8d9f4a2dd5b4d02","ref":"refs/heads/develop","pushedAt":"2024-04-28T14:56:59.000Z","pushType":"push","commitsCount":345,"pusher":{"login":"vbraun","name":"Volker 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It should work fine on old gap so this can\nbe merged just fine.\n\n### :memo: Checklist\n\n\n\n- [x] The title is concise and informative.\n- [x] The description explains in detail what this PR is about.\n\nURL: https://github.com/sagemath/sage/pull/37883\nReported by: Gonzalo Tornaría\nReviewer(s): Travis Scrimshaw","shortMessageHtmlLink":"sagemathgh-37883: gap: don't use deprecated LaTeX() and LaTeXObj()"}},{"before":"22741398fc33518516a76497d6a0022b01871bcc","after":"0a7b2513287af1124a358c2494b8bef4668a1882","ref":"refs/heads/develop","pushedAt":"2024-04-26T02:14:11.000Z","pushType":"push","commitsCount":25,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37790: Improve docstrings in `groups`\n\nI parsed the `groups` module like a _robot_ and I edited the\ndocstrings. (e.g. 1-line outputs, self to ``self``)\n\n### :hourglass: Dependencies\n\nDepends on #37789.\n\nURL: https://github.com/sagemath/sage/pull/37790\nReported by: gmou3\nReviewer(s): Matthias Köppe","shortMessageHtmlLink":"sagemathgh-37790: Improve docstrings in groups"}},{"before":"75b34ed20a39f2f5c4b846052f88b9f0f45e1b4b","after":"22741398fc33518516a76497d6a0022b01871bcc","ref":"refs/heads/develop","pushedAt":"2024-04-25T02:41:02.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"vbraun","name":"Volker Braun","path":"/vbraun","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/888729?s=80&v=4"},"commit":{"message":"gh-37778: Make univariate Laurent polynomials over a field pass the TestSuite\n\n\n\n\n\n\n\n\nThe output of `xgcd` does not match the `gcd` output, but this is\nrequired by #17671. We change the computation to make these match. We\nalso fix another bug as it should also take non-Laurent polynomial\ninputs to `xgcd`.\n\nWe also implement the `euclidean_domain()` method.\n\n### :memo: Checklist\n\n\n\n- [x] The title is concise and informative.\n- [x] The description explains in detail what this PR is about.\n- [x] I have linked a relevant issue or discussion.\n- [x] I have created tests covering the changes.\n- [x] I have updated the documentation accordingly.\n\n### :hourglass: Dependencies\n\n\n\n\n\nURL: https://github.com/sagemath/sage/pull/37778\nReported by: Travis Scrimshaw\nReviewer(s): Enrique Manuel Artal Bartolo, Travis Scrimshaw","shortMessageHtmlLink":"sagemathgh-37778: Make univariate Laurent polynomials over a field pa…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEV0dLbQA","startCursor":null,"endCursor":null}},"title":"Activity · vbraun/sage"}