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@Computational-Genomics-BSC

Computational Genomics (BSC-CNS)

Computational Genomics group in Life Sciences department at Barcelona Supercomputing Center – Centro Nacional de Supercomputación (BSC-CNS)

Popular repositories

  1. GenomeVariator GenomeVariator Public

    Tool for adding genomic variants to an existing genome (in SAM/BAM/CRAM format). Currently supported variants are SNVs, indels and SVs (insertions, deletions, translocations, inversions and duplica…

    Python

  2. GenomeMosaicMaker GenomeMosaicMaker Public

    Tool for copying read-alignments regions centered around variants (in VCF/VCF.GZ/BCF format) from existing genomes (in SAM/BAM/CRAM format) to insert them into canvas genomes (in SAM/BAM/CRAM format).

    Python

Repositories

Showing 2 of 2 repositories
  • GenomeVariator Public

    Tool for adding genomic variants to an existing genome (in SAM/BAM/CRAM format). Currently supported variants are SNVs, indels and SVs (insertions, deletions, translocations, inversions and duplications). It generates realistic genomes as almost always less than 99% of the original real genome is modified.

    Python 0 0 0 0 Updated Apr 18, 2024
  • GenomeMosaicMaker Public

    Tool for copying read-alignments regions centered around variants (in VCF/VCF.GZ/BCF format) from existing genomes (in SAM/BAM/CRAM format) to insert them into canvas genomes (in SAM/BAM/CRAM format).

    Python 0 0 0 0 Updated Mar 25, 2024

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