Skip to content
@Deep-MI

Deep Medical Imaging Lab (PI Reuter)

Repositories of the Reuter DeepMI Lab

Pinned

  1. FastSurfer FastSurfer Public

    PyTorch implementation of FastSurferCNN

    Jupyter Notebook 428 106

  2. FatSegNet FatSegNet Public

    Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI

    Python 21 11

  3. fsqc fsqc Public

    A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data

    Python 50 13

  4. LaPy LaPy Public

    Toolbox for Differential Geometry on Triangle and Tetrahedra Meshes (FEM, Laplace, Poisson, Heat Flow ...)

    Python 52 13

  5. BrainPrint BrainPrint Public

    A python-only derivative of the original BrainPrint scripts

    Python 11 9

  6. olf-bulb-segmentation olf-bulb-segmentation Public

    Automated Olfactory Bulb Segmentation Pipeline for T2-Weighted MRI

    Jupyter Notebook 6 1

Repositories

Showing 10 of 16 repositories
  • WhipperSnapPy Public

    Python OpenGL Tool for Screenshots of Surface Overlays

    Python 0 MIT 7 1 1 Updated May 14, 2024
  • FastSurfer Public

    PyTorch implementation of FastSurferCNN

    Jupyter Notebook 428 Apache-2.0 106 11 3 Updated May 13, 2024
  • hipsta Public

    HIPSTA - a python package for hippocampal shape and thickness analysis

    Python 1 MIT 0 1 0 Updated May 13, 2024
  • LaPy Public

    Toolbox for Differential Geometry on Triangle and Tetrahedra Meshes (FEM, Laplace, Poisson, Heat Flow ...)

    Python 52 MIT 13 6 0 Updated May 13, 2024
  • BrainPrint Public

    A python-only derivative of the original BrainPrint scripts

    Python 11 MIT 9 0 0 Updated May 13, 2024
  • fsqc Public

    A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data

    Python 50 MIT 13 3 0 Updated May 13, 2024
  • Deep-MI.github.io Public

    Deep Medical Imaging Lab Webpage

    TeX 2 MIT 12 0 0 Updated May 6, 2024
  • DISCUS Public

    The repository contains code for the Geometric Deep Learning for Diffusion MRI Signal Reconstruction with Continuous Samplings (DISCUS) project

    Python 2 0 0 0 Updated Apr 22, 2024
  • Python 0 MIT 0 0 0 Updated Apr 9, 2024
  • head-motion-from-MRI Public

    Code for the paper "Estimating Head Motion from MRI", which predicts motion scores directly from MRI images.

    Python 2 Apache-2.0 2 0 0 Updated Mar 22, 2024

Top languages

Loading…

Most used topics

Loading…