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[WIP] Paper about the UDF interface #570

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@uellue uellue commented Jan 31, 2020

This is very much work in progress. Posted here because of previous positive experience with collaborative writing: #460

Possible target journal: https://www.journals.elsevier.com/information-systems (focus on data intensive applications, scientific computing)

Points to consider:

  • Make clear WHY we are building this interface in the first place.
  • Go beyond electron microscopy
  • Compare API with Hadoop, Spark, Dask arrays (anything else?)
    • How to do that objectively?
    • Which criteria? Performance, ease of use, scalability, flexibility, ...?
  • Show clearly why the API is what it is, reasons for its structure and features
  • Show where it is innovative and how it can be of general use beyond being an implementation detail of LiberTEM
  • Balance UDF and Blobfinder aspects
  • Show how Blobfinder is the lead application, the application is much wider, however
  • Keep it short and precise, not a boring reference documentation
  • Don't require insider knowledge of LiberTEM or electron microscopy to understand
  • Cover both the design process as well as the result on high, scientific level

In that sense, feedback and suggestions for changes, including sweeping ones, are very welcome!

Contributor Checklist:

@uellue uellue added the WIP label Jan 31, 2020
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codecov bot commented Jan 31, 2020

Codecov Report

Merging #570 into master will decrease coverage by 0.02%.
The diff coverage is n/a.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #570      +/-   ##
==========================================
- Coverage   58.81%   58.79%   -0.03%     
==========================================
  Files         208      208              
  Lines        8316     8316              
  Branches     1062     1062              
==========================================
- Hits         4891     4889       -2     
- Misses       3229     3230       +1     
- Partials      196      197       +1
Impacted Files Coverage Δ
src/libertem/udf/blobfinder/correlation.py 97.99% <0%> (-0.81%) ⬇️

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