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Pinned

  1. genomad genomad Public

    geNomad: Identification of mobile genetic elements

    Python 155 17

  2. RNAsamba RNAsamba Public

    A tool for computing the coding potential of RNA transcript sequences using deep learning classification model

    Python 50 3

  3. taxopy taxopy Public

    A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers

    Python 34 5

  4. tspex tspex Public

    tspex: tissue-specificity calculator

    Python 24 9

  5. pycoverm pycoverm Public

    Simple Python interface to CoverM's fast coverage estimation functions

    Rust 6 2

  6. magpurify2 magpurify2 Public

    Identify and remove contaminants from metagenome-assembled genomes

    Python 14 3