Update group comparison

cBioPortal · Mar 22, 2023 · 5c6c1e1 · 5c6c1e1
1 parent fc00388
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Showing 7 changed files with 37 additions and 35 deletions.
diff --git a/...group_comparison_alteration_enrichments_two_groups_element_chrome_1600x1000.png b/...group_comparison_alteration_enrichments_two_groups_element_chrome_1600x1000.png
diff --git a/...rison_page_alteration_enrichments_tab_patient_mode_element_chrome_1600x1000.png b/...rison_page_alteration_enrichments_tab_patient_mode_element_chrome_1600x1000.png
diff --git a/...comparison_tab_alteration_enrichments_patient_mode_element_chrome_1600x1000.png b/...comparison_tab_alteration_enrichments_patient_mode_element_chrome_1600x1000.png
diff --git a/...mparison_tab_alteration_enrichments_several_groups_element_chrome_1600x1000.png b/...mparison_tab_alteration_enrichments_several_groups_element_chrome_1600x1000.png
diff --git a/...w_comparison_tab_alteration_enrichments_two_groups_element_chrome_1600x1000.png b/...w_comparison_tab_alteration_enrichments_two_groups_element_chrome_1600x1000.png
diff --git a/end-to-end-test/local/specs/annotation-filter-menu.spec.js b/end-to-end-test/local/specs/annotation-filter-menu.spec.js
@@ -566,6 +566,7 @@ describe('alteration filter menu', function() {
         // -+=+ MUTATION STATUS +=+-
         it('filters enrichment table when unchecking germline checkbox', () => {
             clickCheckBoxResultsView('Germline');
+
             assert.deepStrictEqual(enrichmentTableCounts(), {
                 DTNB: { alt: '1 (100.00%)', unalt: '0 (0.00%)' },
                 ADAMTS20: { alt: '1 (100.00%)', unalt: '0 (0.00%)' },

diff --git a/src/pages/groupComparison/AlterationEnrichments.tsx b/src/pages/groupComparison/AlterationEnrichments.tsx
@@ -51,40 +51,28 @@ export default class AlterationEnrichments extends React.Component<
         render: () => {
             let headerName = GENOMIC_ALTERATIONS_TAB_NAME;
             return (
-                <>
-                    {getServerConfig().skin_show_settings_menu && (
-                        <AlterationFilterMenuSection
-                            store={this.props.store}
-                            updateSelectedEnrichmentEventTypes={
-                                this.props.store
-                                    .updateSelectedEnrichmentEventTypes
-                            }
-                        />
-                    )}
-                    <div data-test="GroupComparisonAlterationEnrichments">
-                        <AlterationEnrichmentContainer
-                            data={
-                                this.props.store.alterationsEnrichmentData
-                                    .result!
-                            }
-                            groups={
-                                this.props.store
-                                    .alterationsEnrichmentAnalysisGroups.result
-                            }
-                            alteredVsUnalteredMode={false}
-                            headerName={headerName}
-                            patientLevelEnrichments={
-                                this.props.store.usePatientLevelEnrichments
-                            }
-                            onSetPatientLevelEnrichments={
-                                this.props.store.setUsePatientLevelEnrichments
-                            }
-                            store={this.props.resultsViewStore}
-                            comparisonStore={this.props.store}
-                            dashToRight={this.useInlineTypeSelectorMenu}
-                        />
-                    </div>
-                </>
+                <div data-test="GroupComparisonAlterationEnrichments">
+                    <AlterationEnrichmentContainer
+                        data={
+                            this.props.store.alterationsEnrichmentData.result!
+                        }
+                        groups={
+                            this.props.store.alterationsEnrichmentAnalysisGroups
+                                .result
+                        }
+                        alteredVsUnalteredMode={false}
+                        headerName={headerName}
+                        patientLevelEnrichments={
+                            this.props.store.usePatientLevelEnrichments
+                        }
+                        onSetPatientLevelEnrichments={
+                            this.props.store.setUsePatientLevelEnrichments
+                        }
+                        store={this.props.resultsViewStore}
+                        comparisonStore={this.props.store}
+                        dashToRight={this.useInlineTypeSelectorMenu}
+                    />
+                </div>
             );
         },
         renderPending: () => (
@@ -94,6 +82,19 @@ export default class AlterationEnrichments extends React.Component<
     });
 
     render() {
-        return this.tabUI.component;
+        return (
+            <>
+                {getServerConfig().skin_show_settings_menu && (
+                    <AlterationFilterMenuSection
+                        store={this.props.store}
+                        updateSelectedEnrichmentEventTypes={
+                            this.props.store.updateSelectedEnrichmentEventTypes
+                        }
+                    />
+                )}
+
+                {this.tabUI.component}
+            </>
+        );
     }
 }