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@chopdgd

Clinical Bioinformatics Group Children's Hospital of Philadelphia

Bioinformatics projects at CHOP's Division of Genomic Diagnostics

Popular repositories

  1. cookiecutter-django-reactjs cookiecutter-django-reactjs Public

    Forked from cookiecutter/cookiecutter-django

    Cookiecutter Django is a framework for jumpstarting production-ready Django and ReactJS projects quickly.

    Python 90 15

  2. django-genome django-genome Public

    Django app for dealing with Human Genome Reference data and keeping it up to date. Syncs data from HGNC and UCSC (RefSeq, etc)

    Python 9

  3. django-phenotype-ontologies django-phenotype-ontologies Public

    Django app for parsing/loading Phenotype ontologies (HPO, MONDO, OncoTree, etc)

    Python 6

  4. bfx-tools-wdl bfx-tools-wdl Public

    WDL tasks for commonly used BFX tools

    WDL 6 5

  5. django-genomix django-genomix Public

    Core library for Nexus django projects. Common utils needed across many apps

    Python 3

  6. somatic_variant_classification somatic_variant_classification Public

    Machine learning classifier to distinguish sequencing artifacts from true SNVs in pediatric cancers

    Python 3

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