-
Notifications
You must be signed in to change notification settings - Fork 57
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Added terms for formats for BioSimulators #766
Open
jonrkarr
wants to merge
33
commits into
edamontology:main
Choose a base branch
from
biosimulators:biosimulators
base: main
Could not load branches
Branch not found: {{ refName }}
Could not load tags
Nothing to show
Are you sure you want to change the base?
Some commits from the old base branch may be removed from the timeline,
and old review comments may become outdated.
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This reverts commit 16d9c8e.
…BML composite, SBML multi-state/multi-species, SBML groups, SBML dFBA, Dockerfile, BioSimulators simulator specifications, and BioSimulators standard for command-line interface
- Corrected encoding of media types for format_3951, format_3969, format_3970, format_3971, format_3972, format_3977 format_3972 - Added media types for format_2585, format_3506, format_3590, format_3620, format_3685, format_3686, format_3688, format_3909, format_3972, format_3977, format_4015 - Added extensions for format_2585, format_3506, format_3590, format_3620, format_3626, format_3685, format_3686, format_3688, format_3972, format_3977, format_4015 - Removed file extension from format_3973 -- Dockerfiles and Docker images are separate formats - Updated publication for format_3909 - Added documentation links for format_3909 - Added publication for format_3951 - Changed documentation to citation for format_3969, format_3970, format_3971, format_3972 - Added citation for format_3977 - Added synonyms for format_3506, format_3620
- removed parent format_2571 of format_3973 - removed parent format_3166 of format_3239
Add terms
…1, format_4021 into separate objects
…o edamontology-main
Kudos, SonarCloud Quality Gate passed! |
jonrkarr
changed the title
Added terms for Biosimulators
Added terms for formats for BioSimulators
Sep 21, 2021
LucieLamothe
added
the
concept/term addition
Request for a new concept(s), or change(s) to existing concept(s)
label
Sep 30, 2021
@veitveit could use approve again? |
…iology project, Scilab script
Kudos, SonarCloud Quality Gate passed! |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
(Restarts PR #729 previously approved by @veitveit which I unintentionally closed by renaming the associated branch. The PR is now merged with EDAM:main as of 9/21/2021.)
This pull request adds several new format terms needed for biomodeling and biosimulation and makes several corrections to existing terms for related formats. We are providing this as a PR to incorporate these terms. We're starting to need these terms and want to avoid trying to work with a fork for EDAM with different identifiers that we'd eventually need to sync with EDAM.