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R scripts to process adbs clinical datasets exported as CSV files from the ADBS clinical server.

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adbs-clinical-database

R scripts to process adbs clinical datasets exported as CSV files from the ADBS clinical server.

Level 1 (Brief Phenotyping)

  • Sociodemographic details
  • Developmental assessment
  • Physical examination, minor physical anomaly
  • Treatment and side effects
  • Addiction - Lifetime History (HOPI_SUD)
  • Bipolar Disorder - Lifetime History (HOPI_BPAD)
  • Schizophrenia - Lifetime History (HOPI_SCZ)
  • Obsessive-Compulsive Disorder - Lifetime History (HOPI_OCD)
  • Dementia - Lifetime History (HOPI_DEM)
  • DSM 5 cross cutting diagnosis - adult (DSM5CC_Adult)
  • DSM 5 cross cutting diagnosis - child (DSM5CC_Child)
  • Family interview for genetic studies with detailed pedigree
  • MINI international neuropsychiatric inventory version 5 (MINI5)
  • Adult ADHD self-report scale version 1.1 (ASRS)
  • Hindi Mental Status Examination (HMSE)
  • Clinical Global Impression Scale(CGI)

Level 2 (Deep Phenotyping)

General Interview:

  • Modified Kuppuswamy Classification Of Socioeconomic Status (SES)
  • Edinburgh Handedness Inventory (EHI)
  • Work And Social Adjustment Scale (WSAS)
  • Global Assessment of Functioning (GAF)
  • Interview For Recent Life Events (IRLE)
  • Adverse Childhood Experiences International Questionnaire (ACE-IQ) https://www.who.int/violence_injury_prevention/violence/activities/adverse_childhood_experiences/en/
  • The Adult Temperament Questionnaire (ATQ) - Short Form: Evans, D.E., & Rothbart, M.K. (2007). Development of a model for adult temperament. Journal of Research in Personality, 41, 868-888.
  • Mini International Personality Item Pool (Mini-IPIP): a 20-item short form of the Five-Factor Model measure
  • The Alcohol, Smoking and Substance Involvement Screening Test (ASSIST) https://www.who.int/substance_abuse/activities/assist/en/
  • Hamilton Anxiety Rating Scale (HAM-A)
  • Hamilton Depression Rating Scale (HDRS)

Disorder-Specific Interview:

  • Scale for the Assessment of Positive Symptoms (SAPS)
  • Scale for the Assessment of Negative Symptoms (SANS)
  • Yale–Brown Obsessive Compulsive Scale (Y-BOCS)
  • Clinical Dementia Rating (CDR)
  • Severity of Alcohol Dependence Questionaire (SADQ)
  • Young Mania Rating Scale (YMRS)
  • Scale for asssessments of Antipsychotic Medication Side-effects (AMSE)

Neurocognitive Tests:

  • Stop-Signal Task: Logan, Gordon D. "On the ability to inhibit thought and action: A users' guide to the stop signal paradigm." (1994).
  • Color Trails Test (CTT) 1 & 2
  • Digit Span Forward (DSF)
  • Rey-Osterrieth Auditory Verbal Learning Test (R-AVLT)
  • Verbal N Back 1&2
  • Social Cognition Rating Tools in Indian Setting (SOCRATIS)

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R scripts to process adbs clinical datasets exported as CSV files from the ADBS clinical server.

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