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jtremblay/README.md

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  1. ShotgunMG ShotgunMG Public

    This repository contains the code for ShotgunMG, a Nextflow bioinformatic pipeline for high-resolution metagenomics

    Nextflow 1 1

  2. microbiomeutils microbiomeutils Public

    Python utility to generate distance matrices, perform PCoAs and generate taxonomic summaries using simple tab-separated feature tables.

    Python 1

  3. PipelineViewer PipelineViewer Public

    D3.js project to view bioinformatics pipelines with force graphs.

    HTML 1

  4. MiRNATarget MiRNATarget Public

    A command line version of the psRNATarget workflow that predicts potential miRNA target locations on a genome.

    Python 5

  5. Microbiomics Microbiomics Public

    Figure generation R package oriented for microbiome data

    R

  6. SingleCell SingleCell Public

    Single cell bioinformatics pipeline

    Nextflow 1