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CHANGELOG.md

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Change Log

All notable changes to this project will be documented in this file. This project adheres to Semantic Versioning.

[0.7.0] - 2016-03-15

Added

  • support for different SQL backends through connection string

[0.6.0] - 2016-02-08

Added

  • Add search form for sample -> plate
  • Save results base on few mismatches
  • Save expected sex from Excel
  • Add delete plate method + view
  • Add compare view between samples

Fixed

  • Order experiments correctly

[0.5.0] - 2016-01-27

Added

  • BCF input support
  • New web interface ^^

[0.4.3] - 2015-11-24

Fixed

  • fix filtering samples by include_key

[0.4.2] - 2015-11-24

Added

  • add new options to cli

[0.4.1] - 2015-11-20

Added

  • include key when reading from Excel to include a subset of samples

[0.4.0] - 2015-11-13

Added

  • use logging module in CLI
  • store sex prediction from excel report in database
  • force option for re-uploading existing samples

Changed

  • Failed uploads are only skipped (upload)
  • List samples from database without ids
  • "experiment" now included in "show" output

[0.3.1] - 2015-09-25

Fixed

  • Support latest vcf_parser

[0.3.0] - 2015-09-08

Changed

  • Require a RS reference for matching
  • Remove dependencies

[0.2.0] - 2015-06-26

Changed

  • Change Sample.origin to Sample.experiment

Added

  • Add Sample.source
  • Update interface accordingly

[0.0.1] - 2014-12-09

First draft release. Everything is new.