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initial release of v0.1.0

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@qingpeng qingpeng released this 23 May 06:45
· 34 commits to master since this release
  • Fully functional for prediction using Spark MLlib DataFrame-based API
  • With updated model, from training using full scale training dataset, with balanced class. (1:1)
  • Features include k-mer, codon frequency, pfam hit, vfam hit, (but without IMG virus HMMs hit)
  • Three use cases:
    • feature extraction and prediction for large number of sequences. (Cloud or HPC environment)
    • all-in-one script to do feature extraction and prediction for small number of sequences. (for local machine)
    • web application for small number of sequences or demo