Rename folder to match external query name #3239

sciety · May 15, 2024 · 3bf0964 · 3bf0964
1 parent 8da6244
commit 3bf0964
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Showing 35 changed files with 20 additions and 20 deletions.
diff --git a/...aluation/access-microbiology/acmi-jats.ts → ...n-digest/access-microbiology/acmi-jats.ts b/...aluation/access-microbiology/acmi-jats.ts → ...n-digest/access-microbiology/acmi-jats.ts
diff --git a/...ology/derive-full-texts-of-evaluations.ts → ...ology/derive-full-texts-of-evaluations.ts b/...ology/derive-full-texts-of-evaluations.ts → ...ology/derive-full-texts-of-evaluations.ts
diff --git a/...y/fetch-access-microbiology-evaluation.ts → ...y/fetch-access-microbiology-evaluation.ts b/...y/fetch-access-microbiology-evaluation.ts → ...y/fetch-access-microbiology-evaluation.ts
diff --git a/...h-evaluation/access-microbiology/index.ts → ...ation-digest/access-microbiology/index.ts b/...h-evaluation/access-microbiology/index.ts → ...ation-digest/access-microbiology/index.ts
diff --git a/...robiology/to-jats-xml-url-of-publisher.ts → ...robiology/to-jats-xml-url-of-publisher.ts b/...robiology/to-jats-xml-url-of-publisher.ts → ...robiology/to-jats-xml-url-of-publisher.ts
diff --git a/...tch-evaluation/create-fetch-evaluation.ts → ...-digest/create-fetch-evaluation-digest.ts b/...tch-evaluation/create-fetch-evaluation.ts → ...-digest/create-fetch-evaluation-digest.ts
@@ -12,7 +12,7 @@ import { Logger } from '../../shared-ports';
 import { ExternalQueries } from '../external-queries';
 import { QueryExternalService } from '../query-external-service';
 
-export const createFetchEvaluation = (queryExternalService: QueryExternalService, logger: Logger): ExternalQueries['fetchEvaluationDigest'] => pipe(
+export const createFetchEvaluationDigest = (queryExternalService: QueryExternalService, logger: Logger): ExternalQueries['fetchEvaluationDigest'] => pipe(
   {
     doi: fetchDoiEvaluationByPublisher(
       {

diff --git a/...h-evaluation/evaluation-digest-fetcher.ts → ...ation-digest/evaluation-digest-fetcher.ts b/...h-evaluation/evaluation-digest-fetcher.ts → ...ation-digest/evaluation-digest-fetcher.ts
diff --git a/...tion/fetch-doi-evaluation-by-publisher.ts → ...gest/fetch-doi-evaluation-by-publisher.ts b/...tion/fetch-doi-evaluation-by-publisher.ts → ...gest/fetch-doi-evaluation-by-publisher.ts
diff --git a/...ch-evaluation-from-appropriate-service.ts → ...ch-evaluation-from-appropriate-service.ts b/...ch-evaluation-from-appropriate-service.ts → ...ch-evaluation-from-appropriate-service.ts
diff --git a/...uation/hypothesis/HypothesisAnnotation.ts → ...digest/hypothesis/HypothesisAnnotation.ts b/...uation/hypothesis/HypothesisAnnotation.ts → ...digest/hypothesis/HypothesisAnnotation.ts
diff --git a/...hypothesis/fetch-hypothesis-annotation.ts → ...hypothesis/fetch-hypothesis-annotation.ts b/...hypothesis/fetch-hypothesis-annotation.ts → ...hypothesis/fetch-hypothesis-annotation.ts
diff --git a/...ties/fetch-evaluation/hypothesis/index.ts → ...tch-evaluation-digest/hypothesis/index.ts b/...ties/fetch-evaluation/hypothesis/index.ts → ...tch-evaluation-digest/hypothesis/index.ts
diff --git a/src/third-parties/fetch-evaluation-digest/index.ts b/src/third-parties/fetch-evaluation-digest/index.ts
@@ -0,0 +1,6 @@
+// Knows how to:
+//  - determine which service an evaluation is hosted on
+//  - fetch a machine-readable digest of the evaluation from that service
+//  - translate the evaluation digest to our domain model
+
+export { createFetchEvaluationDigest } from './create-fetch-evaluation-digest';
diff --git a/...-evaluation/ncrc/construct-ncrc-review.ts → ...tion-digest/ncrc/construct-ncrc-review.ts b/...-evaluation/ncrc/construct-ncrc-review.ts → ...tion-digest/ncrc/construct-ncrc-review.ts
diff --git a/...etch-evaluation/ncrc/fetch-ncrc-review.ts → ...aluation-digest/ncrc/fetch-ncrc-review.ts b/...etch-evaluation/ncrc/fetch-ncrc-review.ts → ...aluation-digest/ncrc/fetch-ncrc-review.ts
diff --git a/...rd-parties/fetch-evaluation/ncrc/index.ts → ...ies/fetch-evaluation-digest/ncrc/index.ts b/...rd-parties/fetch-evaluation/ncrc/index.ts → ...ies/fetch-evaluation-digest/ncrc/index.ts
diff --git a/...parties/fetch-evaluation/ncrc/sheet-id.ts → .../fetch-evaluation-digest/ncrc/sheet-id.ts b/...parties/fetch-evaluation/ncrc/sheet-id.ts → .../fetch-evaluation-digest/ncrc/sheet-id.ts
diff --git a/...on/prelights/fetch-prelights-highlight.ts → ...st/prelights/fetch-prelights-highlight.ts b/...on/prelights/fetch-prelights-highlight.ts → ...st/prelights/fetch-prelights-highlight.ts
diff --git a/...rties/fetch-evaluation/prelights/index.ts → ...etch-evaluation-digest/prelights/index.ts b/...rties/fetch-evaluation/prelights/index.ts → ...etch-evaluation-digest/prelights/index.ts
diff --git a/...ation/rapid-reviews/fetch-rapid-review.ts → ...igest/rapid-reviews/fetch-rapid-review.ts b/...ation/rapid-reviews/fetch-rapid-review.ts → ...igest/rapid-reviews/fetch-rapid-review.ts
diff --git a/...s/fetch-evaluation/rapid-reviews/index.ts → ...-evaluation-digest/rapid-reviews/index.ts b/...s/fetch-evaluation/rapid-reviews/index.ts → ...-evaluation-digest/rapid-reviews/index.ts
diff --git a/...-evaluation/zenodo/fetch-zenodo-record.ts → ...tion-digest/zenodo/fetch-zenodo-record.ts b/...-evaluation/zenodo/fetch-zenodo-record.ts → ...tion-digest/zenodo/fetch-zenodo-record.ts
diff --git a/...-parties/fetch-evaluation/zenodo/index.ts → ...s/fetch-evaluation-digest/zenodo/index.ts b/...-parties/fetch-evaluation/zenodo/index.ts → ...s/fetch-evaluation-digest/zenodo/index.ts
diff --git a/src/third-parties/fetch-evaluation-human-readable-original-url.ts b/src/third-parties/fetch-evaluation-human-readable-original-url.ts
@@ -1,7 +1,7 @@
 import { URL } from 'url';
 import * as TE from 'fp-ts/TaskEither';
 import { pipe } from 'fp-ts/function';
-import { fetchNcrcHumanReadableOriginalUrl } from './fetch-evaluation/ncrc/fetch-ncrc-review';
+import { fetchNcrcHumanReadableOriginalUrl } from './fetch-evaluation-digest/ncrc/fetch-ncrc-review';
 import { Logger } from '../shared-ports';
 import * as DE from '../types/data-error';
 import {

diff --git a/src/third-parties/fetch-evaluation/index.ts b/src/third-parties/fetch-evaluation/index.ts
diff --git a/src/third-parties/instantiate.ts b/src/third-parties/instantiate.ts
@@ -5,7 +5,7 @@ import { CachingFetcherOptions, createCachingFetcher } from './cache';
 import { fetchExpressionFrontMatter, crossrefResponseBodyCachePredicate } from './crossref';
 import { searchEuropePmc } from './europe-pmc';
 import { ExternalQueries } from './external-queries';
-import { createFetchEvaluation } from './fetch-evaluation';
+import { createFetchEvaluationDigest } from './fetch-evaluation-digest';
 import { fetchEvaluationHumanReadableOriginalUrl } from './fetch-evaluation-human-readable-original-url';
 import { fetchPublishingHistory } from './fetch-publishing-history';
 import { createFetchRecommendedPapers } from './fetch-recommended-papers';
@@ -45,7 +45,7 @@ export const instantiate = (
   );
 
   return {
-    fetchEvaluationDigest: createFetchEvaluation(queryExternalService, logger),
+    fetchEvaluationDigest: createFetchEvaluationDigest(queryExternalService, logger),
     fetchEvaluationHumanReadableOriginalUrl: fetchEvaluationHumanReadableOriginalUrl(logger),
     fetchExpressionFrontMatter: fetchExpressionFrontMatter(
       queryCrossrefService,

diff --git a/.../derive-full-texts-of-evaluations.test.ts → .../derive-full-texts-of-evaluations.test.ts b/.../derive-full-texts-of-evaluations.test.ts → .../derive-full-texts-of-evaluations.test.ts
@@ -1,6 +1,6 @@
 import * as E from 'fp-ts/Either';
 import { pipe } from 'fp-ts/function';
-import { deriveFullTextsOfEvaluations } from '../../../../src/third-parties/fetch-evaluation/access-microbiology/derive-full-texts-of-evaluations';
+import { deriveFullTextsOfEvaluations } from '../../../../src/third-parties/fetch-evaluation-digest/access-microbiology/derive-full-texts-of-evaluations';
 import { SanitisedHtmlFragment } from '../../../../src/types/sanitised-html-fragment';
 import { dummyLogger } from '../../../dummy-logger';
 import { abortTest } from '../../../framework/abort-test';

diff --git a/...ch-access-microbiology-evaluation.test.ts → ...ch-access-microbiology-evaluation.test.ts b/...ch-access-microbiology-evaluation.test.ts → ...ch-access-microbiology-evaluation.test.ts
@@ -1,6 +1,6 @@
 import * as TE from 'fp-ts/TaskEither';
 import { pipe } from 'fp-ts/function';
-import { fetchAccessMicrobiologyEvaluation } from '../../../../src/third-parties/fetch-evaluation/access-microbiology/fetch-access-microbiology-evaluation';
+import { fetchAccessMicrobiologyEvaluation } from '../../../../src/third-parties/fetch-evaluation-digest/access-microbiology/fetch-access-microbiology-evaluation';
 import { QueryExternalService } from '../../../../src/third-parties/query-external-service';
 import { SanitisedHtmlFragment } from '../../../../src/types/sanitised-html-fragment';
 import { dummyLogger } from '../../../dummy-logger';

diff --git a/...logy/to-jats-xml-url-of-publisher.test.ts → ...logy/to-jats-xml-url-of-publisher.test.ts b/...logy/to-jats-xml-url-of-publisher.test.ts → ...logy/to-jats-xml-url-of-publisher.test.ts
@@ -1,5 +1,5 @@
 import * as O from 'fp-ts/Option';
-import { toJatsXmlUrlOfPublisher } from '../../../../src/third-parties/fetch-evaluation/access-microbiology/to-jats-xml-url-of-publisher';
+import { toJatsXmlUrlOfPublisher } from '../../../../src/third-parties/fetch-evaluation-digest/access-microbiology/to-jats-xml-url-of-publisher';
 import { arbitraryWord } from '../../../helpers';
 
 describe('to-jats-xml-url-of-publisher', () => {

diff --git a/...fetch-doi-evaluation-by-publisher.test.ts → ...fetch-doi-evaluation-by-publisher.test.ts b/...fetch-doi-evaluation-by-publisher.test.ts → ...fetch-doi-evaluation-by-publisher.test.ts
@@ -1,6 +1,6 @@
 import * as E from 'fp-ts/Either';
 import * as TE from 'fp-ts/TaskEither';
-import { fetchDoiEvaluationByPublisher } from '../../../src/third-parties/fetch-evaluation/fetch-doi-evaluation-by-publisher';
+import { fetchDoiEvaluationByPublisher } from '../../../src/third-parties/fetch-evaluation-digest/fetch-doi-evaluation-by-publisher';
 import * as DE from '../../../src/types/data-error';
 import { SanitisedHtmlFragment } from '../../../src/types/sanitised-html-fragment';
 import { dummyLogger } from '../../dummy-logger';

diff --git a/...aluation-from-appropriate-service.test.ts → ...aluation-from-appropriate-service.test.ts b/...aluation-from-appropriate-service.test.ts → ...aluation-from-appropriate-service.test.ts
@@ -2,7 +2,7 @@ import * as E from 'fp-ts/Either';
 import * as T from 'fp-ts/Task';
 import * as TE from 'fp-ts/TaskEither';
 import { flow, identity, pipe } from 'fp-ts/function';
-import { fetchEvaluationFromAppropriateService } from '../../../src/third-parties/fetch-evaluation/fetch-evaluation-from-appropriate-service';
+import { fetchEvaluationFromAppropriateService } from '../../../src/third-parties/fetch-evaluation-digest/fetch-evaluation-from-appropriate-service';
 import * as DE from '../../../src/types/data-error';
 import * as RI from '../../../src/types/evaluation-locator';
 import { arbitrarySanitisedHtmlFragment } from '../../helpers';

diff --git a/...hesis/fetch-hypothesis-annotation.test.ts → ...hesis/fetch-hypothesis-annotation.test.ts b/...hesis/fetch-hypothesis-annotation.test.ts → ...hesis/fetch-hypothesis-annotation.test.ts
@@ -1,8 +1,8 @@
 import * as E from 'fp-ts/Either';
 import * as TE from 'fp-ts/TaskEither';
 import { pipe } from 'fp-ts/function';
-import { HypothesisAnnotation } from '../../../../src/third-parties/fetch-evaluation/hypothesis/HypothesisAnnotation';
-import { fetchHypothesisAnnotation, insertSelectedText } from '../../../../src/third-parties/fetch-evaluation/hypothesis/fetch-hypothesis-annotation';
+import { HypothesisAnnotation } from '../../../../src/third-parties/fetch-evaluation-digest/hypothesis/HypothesisAnnotation';
+import { fetchHypothesisAnnotation, insertSelectedText } from '../../../../src/third-parties/fetch-evaluation-digest/hypothesis/fetch-hypothesis-annotation';
 import { dummyLogger } from '../../../dummy-logger';
 import { arbitraryWord } from '../../../helpers';
 import { shouldNotBeCalled } from '../../../should-not-be-called';

diff --git a/...elights/fetch-prelights-highlight.test.ts → ...elights/fetch-prelights-highlight.test.ts b/...elights/fetch-prelights-highlight.test.ts → ...elights/fetch-prelights-highlight.test.ts
@@ -2,7 +2,7 @@ import * as E from 'fp-ts/Either';
 import * as T from 'fp-ts/Task';
 import * as TE from 'fp-ts/TaskEither';
 import { flow, identity, pipe } from 'fp-ts/function';
-import { fetchPrelightsHighlight } from '../../../../src/third-parties/fetch-evaluation/prelights/fetch-prelights-highlight';
+import { fetchPrelightsHighlight } from '../../../../src/third-parties/fetch-evaluation-digest/prelights/fetch-prelights-highlight';
 import * as DE from '../../../../src/types/data-error';
 import { dummyLogger } from '../../../dummy-logger';
 import { arbitraryString, arbitraryUrl } from '../../../helpers';

diff --git a/.../rapid-reviews/fetch-rapid-review.test.ts → .../rapid-reviews/fetch-rapid-review.test.ts b/.../rapid-reviews/fetch-rapid-review.test.ts → .../rapid-reviews/fetch-rapid-review.test.ts
@@ -2,7 +2,7 @@ import * as E from 'fp-ts/Either';
 import * as T from 'fp-ts/Task';
 import * as TE from 'fp-ts/TaskEither';
 import { flow, identity, pipe } from 'fp-ts/function';
-import { fetchRapidReview } from '../../../../src/third-parties/fetch-evaluation/rapid-reviews/fetch-rapid-review';
+import { fetchRapidReview } from '../../../../src/third-parties/fetch-evaluation-digest/rapid-reviews/fetch-rapid-review';
 import * as DE from '../../../../src/types/data-error';
 import { HtmlFragment } from '../../../../src/types/html-fragment';
 import { dummyLogger } from '../../../dummy-logger';

diff --git a/...uation/zenodo/fetch-zenodo-record.test.ts → ...digest/zenodo/fetch-zenodo-record.test.ts b/...uation/zenodo/fetch-zenodo-record.test.ts → ...digest/zenodo/fetch-zenodo-record.test.ts
@@ -1,6 +1,6 @@
 import * as E from 'fp-ts/Either';
 import * as TE from 'fp-ts/TaskEither';
-import { fetchZenodoRecord } from '../../../../src/third-parties/fetch-evaluation/zenodo/fetch-zenodo-record';
+import { fetchZenodoRecord } from '../../../../src/third-parties/fetch-evaluation-digest/zenodo/fetch-zenodo-record';
 import * as DE from '../../../../src/types/data-error';
 import { dummyLogger } from '../../../dummy-logger';
 import { arbitraryHtmlFragment } from '../../../helpers';