Website for the JuliaHealth organization (powered by Franklin.jl).

Accelerate common Petri dish assays with AI.

Chinese Mammography Database (CMMD dataset) Deep Learning Classification Pipeline

curated links and customized materials to support biomedical researchers in implementing open science approaches

A resource for biomedical students and researchers. Includes proteomics software tools like FragPipe, MaxQuant, PDV, SearchGUI, ThermoRawFileParser, and PeptideShaker. Offers a user-friendly interface, automated identification and quantification, comprehensive data analysis, and lightweight clone feature for optimized storage.

Repository containing trained YOLOv5 object detection models used within OnePetri for Petri dish and plaque detection.

Collaboratively written manuscript discussing Ten Simple Rules for Enabling Open Science in Biomedical Research

Biomedical knowledge graph & graph neural network models for drug repurposing.

suggestions to practice machine learning for biomedical applications

B.Sc. Thesis Deep Learning & NLP research on Medical Image Captioning

My assignments and projects concerned with Biomedical Engineering

This is a repository of template files to store metadata of laboratory experiments.

This research project is part of a PhD by Lee Jones and will examine statistical quality in health and biomedical research by focusing on linear regression models. The goal of this study is to explore current statistical practice and identify common statistical misconceptions and errors made by researchers. We expect our results will highlight t…

Repository of excel templates of routine tasks performed in the laboratory

Python Implementation of the Human Sinoatrial Node model of Fabbri et al. 2017

Unofficial Python wrapper for the NCBI LitSense API

Deep Learning applications for eary stages of Alzheimer's disease detection.