htslib
Here are 34 public repositories matching this topic...
SeqAn's official repository.
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Apr 12, 2024 - C++
cython + htslib == fast VCF and BCF processing
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May 25, 2024 - Cython
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
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May 18, 2024 - C++
Graph realignment tools for structural variants
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Dec 8, 2022 - C++
nim wrapper for htslib for parsing genomics data files
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Mar 19, 2024 - Nim
pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
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Mar 3, 2017 - Python
Process Illumina instrument data into SAM/BAM/CRAM files.
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May 23, 2024 - C
BigWig manpulation tools using libBigWig and htslib
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Mar 17, 2021 - C
a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.
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Apr 8, 2024 - C++
Some useless thing for Speech Synthesis System
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Nov 21, 2018 - C
Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts
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Dec 11, 2020 - C
vcfpp.h + htslib + Rcpp = fast VCF/BCF https://doi.org/10.1093/bioinformatics/btae049
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May 24, 2024 - C
HTSlib bindings for Crystal
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May 2, 2024 - Crystal
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