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@seqan

SeqAn

SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data.

Pinned

  1. seqan3 seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    C++ 389 80

  2. seqan seqan Public

    SeqAn's official repository.

    C++ 458 170

Repositories

Showing 10 of 47 repositories
  • seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    C++ 389 80 26 2 Updated May 7, 2024
  • sharg-parser Public

    The modern argument parser for c++ tools

    C++ 8 7 15 6 Updated Apr 29, 2024
  • hibf_benchmarks Public

    WIP HIBF benchmarks

    Python 0 BSD-3-Clause 2 0 1 Updated Apr 19, 2024
  • seqan Public

    SeqAn's official repository.

    C++ 458 170 106 4 Updated Apr 12, 2024
  • stellar3 Public

    the SwifT Exact LocaL AligneR

    C++ 0 BSD-3-Clause 1 0 0 Updated Apr 3, 2024
  • app-template Public template

    This template comes pre-configured with various SeqAn libraries and a basic Continuous Integration setup. It is designed to provide a robust starting point for your projects, while offering the flexibility to customize and adapt to your specific requirements.

    CMake 6 9 19 0 Updated Mar 22, 2024
  • hibf Public

    HIBF and IBF

    C++ 4 2 4 4 Updated Mar 18, 2024
  • raptor Public

    A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

    C++ 51 17 7 3 Updated Mar 18, 2024
  • chopper Public

    A tool for partitioning a set of sequences into similar batches.

    C++ 9 BSD-3-Clause 9 6 1 Updated Mar 15, 2024
  • cmake-scripts Public
    CMake 0 1 0 0 Updated Mar 13, 2024
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