R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
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Updated
Jun 6, 2024 - R
R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
Workflow and R scripts for Giongo et al. (2024)
A python package to calculate the dysbiosis score in microbiome datasets
Microbiome Analysis Plotting and Visualization
An ensemble of functions for easier and quicker preliminary microbiome analyses
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short-read amplicon data visualization suite
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MicrobiomeStat Tutorial Repository: This is a comprehensive resource for learning how to use the MicrobiomeStat package. It provides a step-by-step guide to effectively analyze complex microbiome data.
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Microbial community dynamics during key life-history transitions in the chemosymbiotic mussel, Gigantidas childressi
genome annotation analyzer for the microbiome analysis
Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations
Qiita - A multi-omics databasing effort
iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
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