Performant, pure-Python subgraph isomorphism and monomorphism search (aka "motif search")
-
Updated
Mar 20, 2024 - Python
Performant, pure-Python subgraph isomorphism and monomorphism search (aka "motif search")
A Python package for gene network analysis
A Python toolkit for setting up benchmarking dataset using biomedical networks
Source code and data for "Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery"
NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity
NXOntology data: making ontologies accessible as simple JSON files
A MUlti-species Network Kernel algorithm to embed proteins from a target network into a source network, creating cross-species representations for various comparative and predictive tasks
A Python package for network analysis through diffusion label propagation algorithms
A Python package for analyzing harmonized biological networks through diffusion algorithms
Scripts and data from "Towards a global investigation of transcriptomic signatures through co-expression networks and pathway knowledge for the identification of disease mechanisms"
Simulating and analyzing dynamical network models
Simulation of interactions miRNA:Competing Targets
Code for my Master project
TBN_learning is a MATLAB implemented hybrid algorithm for learning the structure of transcriptional Bayesian networks on a genome-wide scale.
A web interface for ontology-based protein network visualization.
This repository contains companion codes, developed for use with the CRC Press Book "An Introduction to Systems Biology" by Karthik Raman
Find deregulated biomolecular networks
BioInformatics with Python
centrality measures in ecological networks
Add a description, image, and links to the network-biology topic page so that developers can more easily learn about it.
To associate your repository with the network-biology topic, visit your repo's landing page and select "manage topics."