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pyproject.toml
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pyproject.toml
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[tool.poetry]
name = "genotype"
version = "4.1.7"
description = "Simple genotype comparison of VCF files"
authors = ["henrikstranneheim <henrik.stranneheim@scilifelab.se>"]
license = "MIT"
readme = "README.md"
[tool.poetry.dependencies]
python = "3.9.17"
alchy = "^2.2.2"
SQLAlchemy = "<1.4"
pymysql = "^1.1.0"
cyvcf2 = "^0.30.28"
xlrd = "1.2.0"
pysam = "*"
PyYAML = "^6.0.1"
coloredlogs = "^15.0.1"
click = "^8.1.7"
Jinja2 = "2.11.2"
MarkupSafe = "2.0.1"
itsdangerous = "1.1.0"
numpy = "1.26.1"
Flask = "1.1.1"
Flask-Bootstrap = "^3.3.7.1"
flask-reverse-proxy = "^0.2.0.2"
Flask-SQLAlchemy = "2.1"
Flask-Alchy = "^0.5.0"
Flask-Security = "^3.0.0"
Werkzeug = "<1.0.0"
Flask-Login = "0.5.0"
Flask-Dance = "3.0.0"
"ruamel.yaml" = "^0.18.6"
gunicorn = "^21.2.0"
[tool.poetry.group.dev.dependencies]
pytest = "5.2"
pytest-mock = "^3.12.0"
pre-commit = "^3.6.2"
mkdocs = "^1.5.3"
mkdocs-material = "8.3.0"
[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"