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VCF visualization interface
HTML 144 43
Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
Python 43 17
Forked from nf-core/raredisease
CG's rare disease pipeline in next flow, see the main repo here 👇
Nextflow 5 1
Mutation Identification Pipeline. Read the latest documentation:
Perl 39 10
Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.
Python 2 3
Microbial Utility Toolbox And wrapper for data traNsmission and Transformation
Python 1
Tool to annotate outfiles from ExpansionHunter with the pathologic implications of the repeat
Chanjo provides a better way to analyze coverage data in clinical sequencing.
Glue between Clinical Genomics apps
Communication layer between CG and the pipelines.
Keep track of and manage analyses
EPPs used in clinical genomics LIMS
Persistent coverage analysis tool using the d4 format
Report generator for Chanjo output
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